What is the genome size of Arabidopsis thaliana?
The genome of Arabidopsis: Contains about 125 megabases of sequence. Encodes approximately 25,500 genes.
What is the genome size of Drosophila melanogaster?
∼180 Mb
The Drosophila genome is ∼180 Mb in size, a third of which is centric heterochromatin (Fig. 1). The 120 Mb of euchromatin is on two large autosomes and the X chromosome; the small fourth chromosome contains only ∼1 Mb of euchromatin.
How many genes are in yeast genome?
Completion of the budding yeast genome sequencing project helped to determine a total of 6,275 genes on 16 chromosomes (12 million base pairs). Yeast possesses 23% homologous genes to humans; therefore, it is considered as a useful model for gene function studies (2).
What is the genome size of E coli?
4.5 to 5.5 Mb
The Escherichia coli genome varies in size from 4.5 to 5.5 Mb.
What is the genome size of T2 phage?
170 kbp long
Replication of Bacterial Viruses coli infecting bacteriophages T2, T4, and T6 are commonly called T-even phages. They have a dsDNA genome 170 kbp long whose termini contain repetitions of 3% of the genome.
How big is the C elegans genome?
about 100 million base pairs long
Size and gene content The C. elegans genome is about 100 million base pairs long and consists of six pairs of chromosomes in hermaphrodites or five pairs of autosomes with XO chromosome in male C. elegans and a mitochondrial genome.
Is yeast DNA circular or linear?
Yeast is a priviledged source of cytoplasmically replicating linear plasmids. These linear DNA molecules can be distinguished in a number of ways from the circular plasmids that replicate in the nucleus.
What is banana genome?
Banana Genomics Genetically, banana is a triploid crop and comprises of both A (M. acuminata) and B (M. balbisiana) genomes. The triploid genetic constitution of banana posed a huge challenge to the sequencing and assembly of its genome. Therefore, a double haploid (PH-Pahang) M.
How many genes are in a T2 phage?
In T2 genes 39 and 60 are fused into one gene (605 amino acids), and it is equivalent to gyrB (Huang, 1990). The T2 39 gene, along with the 52 gene, encode the smallest topo II. These prokaryotic phage proteins share significant homology with the bacterial gyrase and the ParE and ParC proteins.
How large is a nematode genome?
The range of genome size across the Nematoda. Most nematodes have genomes ranging from 50–250 Mb (Leroy et al., 2003; Figure 1). Among the nematodes being sequenced, sizes vary from 53 Mb for Haemonchus contortus (Leroy et al., 2003) to 240 Mb for Trichinella spiralis (Hammond and Bianco, 1992).
What is the actual genome size of nipponbare rice?
Since the rDNA regions, which are estimated to span a total of 3.7 Mbp (Ohmido et al. 2000; Oono and Sugiura 1980 ), are not included in this estimate, the actual genome size of the Nipponbare cultivar is 384.2-386.5 Mbp. Thus, the new assembly covers 96.6-97.1% of the entire Nipponbare rice genome.
How was the nipponbare genome assembly updated?
The Nipponbare genome assembly was updated by revising and validating the minimal tiling path of clones with the optical map for rice. Sequencing errors in the revised genome assembly were identified by re-sequencing the genome of two different Nipponbare individuals using the Illumina Genome Analyzer II/IIx platform.
What is the normal distribution amount of nipponbare?
The normal distribution amount is 100 grams. Click here for information on how to request this amount of Nipponbare and to see references to publications describing work using this GSOR source of Nipponbare. If you require a larger amount, please contact the GSOR directly at [email protected].
Which pseudomolecules do Oryza sativa and nipponbare japonica align with?
Oryza sativa ssp. japonica Nipponbare chloroplast (GenBank NC_001320) and mitochondrial (GenBank BA000029) sequences were aligned with the pseudomolecules using BLASTN and MUMmer 49.